Molecular Docking and
Antiviral Compounds Online
Course Structure
Molecular Virology
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Introduction to Viruses
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Viruses- problem must be solved
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Viral Pathogenesis
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Host Defenses against Viruses
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Barrier Defenses
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The Innate Defense System
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The Adaptive Immune System
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Viral Detection
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Introduction to Computer Aided Drug Design
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Databases for drug design
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Zinc Database
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Drug Bank
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Drugs.com
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PubChem
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Drawing Drug Structure
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Drugs Likeness Properties (Theoretical and Practical)
Target audience
Students of biotechnology, chemistry, pharmacy, medicine and employees from governmental labs/ Institutes, Industries, pharmacies, Hospitals, Pathology and microbiology Laboratories.
Molecular Docking - (Practical)
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Ligand Preparation
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PubChem Database for 3D Structure
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Chem-Sketch Software for 3D Structure from Canonical SMILES
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Open-Babel Software to Convert SDF or MOL to PDB Format
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Autodock4 Software to Convert PDB to PDBQT Format
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Protein Modelling
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Protein Data Bank Database
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Swiss-Model Server for Protein Modeling
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Protein Preparation
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Autodock 4 to Prepare Protein for Docking
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Active Site Prediction
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Final Docking
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Autodock Vina Software
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Analysis of Final Structure
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Chimera Software
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Cost: 650 EGP
Timing & Access

20 Hours

3 Days

CEB Academy, G1, Building no. 44 A, Dokki street, Giza

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